Theoretical Thermodynamic Study of Solvent Effects on Serine and Threonine Amino Acids at Different Temperatures

author

  • Farideh Keshavarz Rezaei Chemistry Department, Faculty of Science, Arak Branch, Islamic Azad University, P.O. Box: 38135-567, Arak, Iran
Abstract:

The thermodynamic functions such as enthalpy (H), Gibbs free energy (G) and entropy (S) of Serineand Threonine amino acids were theoretically studied at different condition (solvents andtemperatures) by using Gussian o3, software. First, the structural optimization of isolated Serine andThreonine were done in the gas phase by using the Hartree-Fock (HF) level of theory with 3-21G, 6-31G and 6-311G basis sets. Moreover, vibrational frequencies were calculated in gas phase on theoptimized geometries at the same level of theory to obtain enthalpy (H) Gibbs free energy (G) andentropy (S) at 7 different temperatures such as (25, 27, 29, 31, 33, 35 and 37°C).Then, the solventeffects are taken into via the self-consistent reaction field (SCRF=PCM) model. Therefore, all of thecalculations were repeated in various solvents (Water, Methanol and Ethanol) and 7 differenttemperatures (25, 27, 29, 31, 33, 35 and 37°C). Thermodynamically analysis shows the relativeenthalpy changes (H) Gibbs free energy changes (G) are negative values but the entropy changes(S) are positive values for Serine and Threonine molecules. Also, the results shows, with increasingdielectric constant of solvent and increasing of temperature the stability of considered moleculesincreases.

Upgrade to premium to download articles

Sign up to access the full text

Already have an account?login

similar resources

theoretical thermodynamic study of solvent effects on serine and threonine amino acids at different temperatures

the thermodynamic functions such as enthalpy (h), gibbs free energy (g) and entropy (s) of serineand threonine amino acids were theoretically studied at different condition (solvents andtemperatures) by using gussian o3, software. first, the structural optimization of isolated serine andthreonine were done in the gas phase by using the hartree-fock (hf) level of theory with 3-21g, 6-31g and 6-3...

full text

Theoretical study of the solvent effects on the thermodynamic functions of Alanine and Valine Amino Acids

Using Gaussian 03, software the thermodynamic functions such as Gibbs free energy, G, Enthalpy, H, and Entropy, S, of Alanine and Valine amino acids were theoretically studied at different solvents. First, the Density Functional Theory (B3LYP) level with 3-21G, 6-31G and 6-31+G basis sets were employed to optimization of isolated Alanine and Valine amino acids in the gas phase. Moreover, Vib...

full text

Theoretical Thermodynamic Study of Arginine and Lysine Amino Acids at different Solvents

The thermodynamic functions such as enthalpy, H°, Gibbs free energy, G°, and entropy, S°, of Arginine and Lysine amino acids were theoretically studied at different polar solvents by using ²Gaussian o3², software. First, the structural optimization of isolated Arginine and Lysine were done in the gas phase by applying the Density Functional Theory (B3LYP) level ...

full text

theoretical study of the solvent effects on the thermodynamic functions of alanine and valine amino acids

using gaussian 03, software the thermodynamic functions such as gibbs free energy, g, enthalpy, h, and entropy, s, of alanine and valine amino acids were theoretically studied at different solvents. first, the density functional theory (b3lyp) level with 3-21g, 6-31g and 6-31+g basis sets were employed to optimization of isolated alanine and valine amino acids in the gas phase. moreover, vib...

full text

Theoretical thermodynamic study of Pyrazole in the gas phase at the different temperatures

The thermodynamic functions such as enthalpy (H), Gibbs free energy (G) and entropy (S) ofPyrazole was theoretically studied at 5 different temperatures 25, 30, 35, 40 and 45°C by usingGussian o3, software. First, the structural optimization of isolated Pyrazole was done in the gas phaseby appling the Density Functional Theory (B3LYP) level with 3-21G, 6-31G and 6-31+G(d) basissets. Moreover, v...

full text

A Thermodynamic Study on Nano-graphene Interaction with the Amino acid Phenylalanine in Acidic and Alkaline conditions at different temperatures

The project is comparing two types of calculation derived graphene. Which one of these carbon graphene linked to the phenylalanine amino acid from the acidic site (-COOH) and another from the base site (-NH2). For this purpose, at first the material contained in the both sides of reaction were geometrically optimized, then the calculation of the thermodynamic parameters performed on ...

full text

My Resources

Save resource for easier access later

Save to my library Already added to my library

{@ msg_add @}


Journal title

volume 12  issue 4

pages  315- 324

publication date 2016-03-01

By following a journal you will be notified via email when a new issue of this journal is published.

Hosted on Doprax cloud platform doprax.com

copyright © 2015-2023